| Single-Cell Signature Explorer |
Single-Cell Signature Explorer is a package of four softwares dedicated to high throughput signature exploration in single-cell RNAseq analysis. |
https://sites.google.com/site/fredsoftwares/products/single-cell-signature-explorer |
|
|
| URD |
URD is an R package designed for reconstructing transcriptional trajectories underlying specification or differentiation processes in the form of a branching tree, using single cell RNA-sequencing data. |
https://schierlab.biozentrum.unibas.ch/urd |
|
|
| STREAM |
STREAM is an interactive computational pipeline for reconstructing complex celluar developmental trajectories from sc-qPCR, scRNA-seq or scATAC-seq data |
https://stream.pinellolab.partners.org/ |
|
|